Bi-Shiang Lin, Kuo-Si Huang, Chang-Biau Yang*, "Linear-space S-table algorithms for the longest common subsequence problem," Theoretical Computer Science, Vol. 964, pp. 113944, July 2023.  [SCIE, EI]

Ting-Wei Liang, Chang-Biau Yang* and Kuo-Si Huang, "An Efficient Algorithm for the Longest Common Palindromic Subsequence Problem," Theoretical Computer Science, Vol. 922, pp. 475-485, June 2022.  [SCIE, EI]

Shou-Fu Lo, Kuo-Tsung Tseng, Chang-Biau Yang*, Kuo-Si Huang, "A Diagonal-based Algorithm for the Longest Common Increasing Subsequence Problem," Theoretical Computer Science, Vol. 815, pp. 69-78, May 2020.  [SCIE, EI]

Chiao-Wei Chiu, Kuo-Si Huang, Chang-Biau Yang* and Chiou-Ting Tseng, "An Adaptive Heuristic Algorithm with the Probabilistic Safety Vector for Fault-Tolerant Routing on the (*n*,*k*)-star Graph," International Journal of Foundations of Computer Science, Vol. 25, No. 06, pp. 723-743, Sept. 2014.  [SCIE]

Yung-Hsing Peng, Chang-Biau Yang*, Kuo-Si Huang and Hsing-Yen Ann, "Efficient  Indexing Algorithms for One-dimensional  Discretely-scaled Strings," Information Processing Letters, Vol. 110, pp. 730-734, July 2010. [SCIE, EI]

Yung-Hsing Peng, Chang-Biau Yang*, Kuo-Si Huang, Chiou-Ting  Tseng and Chiou-Yi Hor,  "Efficient Sparse Dynamic Programming  for the Merged LCS Problem with Block Constraints,"  International Journal of Innovative Computing, Information and  Control, Vol. 6, No. 4, pp. 1935-1947, April 2010. [SCIE, EI]

Yung-Hsing Peng, Chang-Biau Yang*, Kuo-Si Huang and Kuo-Tsung Tseng, "An  Algorithm and Applications to Sequence  Alignment with Weighted Constraints," International Journal of  Foundations of Computer Science, Vol. 21, Issue 1, pp. 51-59, Feb.2010. [SCIE]

Chia-Ning Yang, Kuo-Si Huang, Chang-Biau Yang* and Chie-Yao  Hsu, "Error-Tolerant  Minimum Finding with DNA Computing,"   International Journal of Innovative Computing, Information and  Control, Vol. 5, No. 10(A), pp. 3045-3057, Oct. 2009. [SCIE, EI]

Kuo-Tsung Tseng, Chang-Biau Yang*, Kuo-Si Huang and Yung-Hsing Peng, "Near-optimal Block Alignments," IEICE Transactions on Information and Systems, Vol.E91-D, No.3, pp. 789-795, 2008. [SCIE, EI]

Kuo-Si Huang, Chang-Biau Yang*, Kuo-Tsung Tseng, Hsing-Yen Ann and Yung-Hsing Peng, "Efficient Algorithms for Finding Interleaving Relationship between Sequences,"  Information Processing Letters, Vol. 105(5), pp. 188-193, 2008. [SCIE, EI]

Kuo-Tsung Tseng, Chang-Biau Yang* and Kuo-Si Huang, "The Better Alignment among Output Alignments," Journal of  Computers, Vol. 18, No. pp. 51-61, Oct. 2007.

Kuo-Si Huang, Chang-Biau Yang*, Kuo-Tsung Tseng, Yung-Hsing Peng and Hsing-Yen Ann, "Dynamic Programming Algorithms for the Mosaic Longest Common Subsequence Problem," Information Processing Letters, Vol. 102(2-3), pp. 99-103, 2007. [SCIE, EI]

Shin-Si Chen, Chang-Biau Yang* and Kuo-Si Huang, "Fractal Image Compression Based on Intra-Block Variance Distribution and Vector Quantization," Optical Engineering, Vol. 41(11),  pp. 2824-2830, Nov. 2002. [SCI, EI]

Yu-Cheng Lin, Chang-Biau Yang*, Kuo-Si Huang and Yung-Hsing Peng, "An Efficient Algorithm with Distance-based Clustering for Detecting Turning Regions on GPS Trajectories," Proc. of the 22nd Conference on Information Technology and Applications in Outlying Islands, pp. 206-211, Kinmen, Taiwan, May, 2024.

Chien-Ting Lee, Chang-Biau Yang* and Kuo-Si Huang, "The Diagonal Method for the Merged Longest Common Increasing Subsequence Problem," Proc. of the 41st Workshop on Combinatorial Mathematics and Computation Theory, pp. 2-7, Taipei, Taiwan, May, 2024.

Chien-Ting Lee, Chang-Biau Yang* and Kuo-Si Huang, "The Merged Longest Common Increasing Subsequence Problem," Proc. of the 16th Asian Conference on Intelligent Information and Database Systems (ACIIDS 2024), pp. 202-212, Ras Al Khaimah, UAE, April, 2024.

Kuo-Si Huang, Yu-Chen Lin, Chang-Biau Yang*, Ho-Chun Lin, Yung-Hsing Peng* and Szu-Hsuan Wang, "An Improved Algorithm with Azimuth Clustering for Detecting Turning Regions on GPS Trajectories," Proc. of the of the 2023 International Conference on Technologies and Applications of Artificial Intelligence (TAAI 2023), Yulin, Taiwan, Dec. 2023.

Ying-Yu Lin, Chang-Biau Yang* and Kuo-Si Huang, "The Prediction of the Best Contract in Non-competitive Bridge Bidding," Proc. of the of the 2023 International Conference on Technologies and Applications of Artificial Intelligence (TAAI 2023), Yulin, Taiwan, Dec. 2023.

Tsung-Lin Lu, Kuo-Si Huang and Chang-Biau Yang*, "An Algorithm for Finding the Longest Common Almost Wave Subsequence with the Trend," Proc. of 14th IIAI International Congress on Advanced Applied Informatics (IIAI-AAI 2023), pp. 424-429, Koriyama, Fukushima, Japan, July 2023.

Jing-Ping Jan, Kuo-Si Huang and Chang-Biau Yang*, "Hand Strength Evaluation in Bridge Games with the Genetic Algorithm," Proc. of the 40th Workshop on Combinatorial Mathematics and Computation Theory, pp. 50-55, Taoyuan, Taiwan, May, 2023.

Shin-Cheng Lin, Kuo-Si Huang and Chang-Biau Yang*, "The Longest Almost Wave Subsequence Problem," Proc. of the 40th Workshop on Combinatorial Mathematics and Computation Theory, pp. 1-8, Taoyuan, Taiwan, May, 2023.

Yuan-Hsiu Tsai, Kuo-Si Huang and Chang-Biau Yang*, "A Fast Method for Searching Similar Protein Sequences," Proc. of the 39th Workshop on Combinatorial Mathematics and Computation Theory, pp. 78-80, Taipei, Taiwan, June 24-25, 2022.

Shao-Xuan Lee, Kuo-Si Huang and Chang-Biau Yang*, "An Efficient Algorithm for Solving the Longest Common Square Subsequence Problem," Proc. of the 39th Workshop on Combinatorial Mathematics and Computation Theory, pp. 34-43, Taipei, Taiwan, June 24-25, 2022.

Tu-Cheng Wu, Chang-Biau Yang* and Kuo-Si Huang, "The Merged Longest Common Subsequence Problems with t-length Substrings and at Least t-length Substrings," Proc. of the 38th Workshop on Combinatorial Mathematics and Computation Theory, pp. 48-54, Taipei, Taiwan, June 30, 2021.

Feng-Yang Tsai, Chang-Biau Yang* and Kuo-Si Huang, "Reconstructing the Amino Acid Scoring Matrix to Improve Homology Detection in Intrinsically Disordered Proteins," Proc. of 2021 Symposium on Digital Life Technologies (DLT2021), 8 pages, Pingtung, Taiwan, May 14-15, 2021.

Hsiu-Chieh Hung, Chang-Biau Yang* and Kuo-Si Huang, "An Efficient Algorithm for Finding the Most Similar Sequence on the Manhattan Distance Model," Proc. of the National Computer Symposium 2019 (NCS 2019), Kinmen, Taiwan, Nov. 14-15, 2019.

Siang-Huai Hung, Chang-Biau Yang* and Kuo-Si Huang, "A Diagonal-based Algorithm for the Constrained Longest Common Subsequence Problem," Proc. of the International Computer Symposium 2018 (ICS 2018), Yunlin, Taiwan, Dec. 20-22, 2018.

Shu-Kai Hung, Kuo-Si Huang and Chang-Biau Yang*, "Time Series Classification with Dissimilarity Space," Proc. of 2018 Symposium on Digital Life Technologies (DLT2018), pp. 70-77, Taichung, Taiwan, June 30 - July 1, 2018.

Wen-Chuan Ho, Kuo-Si Huang and Chang-Biau Yang*, "A Fast Algorithm for the Constrained Longest Common Subsequence Problem with Small Alphabet," Proc. of the 34th Workshop on Combinatorial Mathematics and Computation Theory, Taichung, Taiwan, May 19-20, 2017.

Guan-Cheng Guo, Kuo-Si Huang and Chang-Biau Yang*, "Time Series Classification Based on the Longest Common Subsequence Similarity and Ensemble Learning," Proc. of 2016 Symposium on Digital Life Technologies, pp. 84-91, Pingtung, Taiwan, June 18-19, 2016.

Che-Jui Hsu, Kuo-Si Huang, Chang-Biau Yang*, Yi-Pu Guo, "Flexible Dynamic Time Warping for Time Series Classification,"  Procedia Computer Science,  Volume 51, Pages 2838-2842, 2015. ICCS 2015 International Conference On Computational Science, Reykjavík, Iceland, June 1-3, 2015.

Kai-Yu Chen, Chang-Biau Yang* and Kuo-Si Huang, "Prediction of Protein Backbone Structure by Preference Classification with SVM," Proc. of the 9th International Conference on Information Systems and Technology Management, Sao Paulo, Brazil, May 30-June 1, 2012.

Chih-Ying Lin, Chang-Biau Yang*, Chiou-Yi Hor and Kuo-Si Huang, "Disulfide Bonding State Prediction with SVM Based on Protein Types", Proc. of IEEE 5th International Conference on Bio-Inspired Computing: Theories and Applications (BIC-TA 2010),  Liverpool, GBR, September 8-10,2010.

Hsiang-Yi Weng, Shyue-Horng Shiau, Chang-Biau Yang*, Yung-Hsing Peng, and Kuo-Si Huang, "An Enhanced ACO Algorithm with Pair Matching Strategy for the Longest Common Subsequence Problem," Proc. of the 9th Conference on Information Technology and Applications in Outlying Islands, Kaohsiung, Taiwan, May 22-24, 2010.

Hsiang-Yi Weng, Shyue-Horng Shiau, Kuo-Si Huang and Chang-Biau Yang*, "A Hybrid Algorithm for the Longest Common Subsequence Problem," Proc. of the 26th Workshop on  Combinatorial Mathematics and Computation Theory, pp. 122-129, Chiayi, Taiwan, April 24-25, 2009.

Jing-Liang Hsin, Chang-Biau Yang*, Kuo-Si Huang and Chia-Ning Yang, "An Ant Colony Optimization Approach for the Protein Side Chain Packing Problem," Proc. of the 6th WSEAS  International Conference on Microelectronics, Nanoelectronics, Optoelectronics,  pp. 44-49, Istanbul, Turkey, May 27-29, 2007.

Yung-Hsing Peng, Chang-Biau Yang*, Kuo-Tsung Tseng and Kuo-Si Huang, "Sequence  Alignment with Weighted Constraints," Proc. of 2006 Symposium on Digital Life Technologies: Building a Safe, Secured and Sound (3S) Living Environment, Tainan, Taiwan, page 36, June 1-2, 2006. (Abstract, full text in CD)

Kuo-Si Huang, Chang-Biau Yang* and Kuo-Tsung Tseng, "Fast Algorithms for Finding the Common Subsequence of Multiple Sequences," Proc. of International Computer  Symposium, page 90, Taipei, Taiwan, Dec. 15-17, 2004. (Abstract, full text in CD) [NSC-90-2213-E-110-015]

Meng-Yi Wu, Chang-Biau Yang* and Kuo-Si Huang, "RNA Secondary Structure  Alignment  Based on Stem Representation," Proc. of the 21st Workshop on Combinatorial Mathematics and Computation Theory, pages 60-69, Taichung, Taiwan, May 21-22, 2004.

Hung-Yuan Wang, Chang-Biau Yang*, Kuo-Si Huang, and Yow-Ling Shiue, "The Design of  Sorters Based on DNA for Bio-Computers," Proc. of International Computer Symposium, Workshop on Algorithms and Computational Molecular Biology, Hualien, Taiwan, Dec. 18-21, 2002.

Ming-Cheng Lin, Chang-Biau Yang* and Kuo-Si Huang, "Prediction of  RNA Secondary  Structures by Genetic Algorithms," Proc. of the 6th World Multiconference on Systemics,  Cybernetics and Informatics, SCI 2002, Vol. 12, Pages 439-444, Orlando, USA, July 14-18, 2002.

Jian-Ming Chen, Chang-Biau Yang* and Kuo-Si Huang, "Image Vector Quantization with Hierarchical Tree Structure," Proc. of CVGIP2001, Pengtung, Taiwan, August 19-21, 2001.

Jenn-Dar Chang, Chang-Biau Yang* and Kuo-Si Huang, "String Superprimitivity Test on the Reconfigurable Bus Model," Proc. of Workshop on the 21st Century Digital Life and Internet Technologies, Tainan, Taiwan, May 17-18, 2001.